Nano-Strainer: A workflow for the identification of single-copy nuclear loci for plant systematic studies, using target capture kits and Oxford Nanopore long reads.

4.3.2 Index 2 and 3 ( k ‐mer‐based similarity, KBS , and mean entropy) Both indices perform well in predicting low‐copy loci from the Leucanthemum dataset, especially the mean entropy, where the difference among values in accepted versus non‐accepted loci (within the 53 loci proposed by script 5_best_loci.r ) is highly significant (Table 8 ).

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