When examining the Capture-C signals for genes >30 kb in length (9/18 capture genes), we observed highly significant (FDR < 0.05) intragenic cDIs for five genes, Trp63 and Tcf7 in basal cells, and Elf5 , Ehf , and Kit in LP cells, with overlapping intragenic SE sites ( Figure 3 H; Table S6 ).
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Three-dimensional genome architecture coordinates key regulators of lineage specification in mammary epithelial cells.
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