For these traits, we ignored those marginally significant SNPs and focused on the most significant QTLs with clustered (genetically linked) significant SNPs.
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Mapping QTLs for blight resistance and morpho-phenological traits in inter-species hybrid families of chestnut (<i>Castanea</i> spp.).
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GWAS on each categorical trait, except for bud shape, produced one highly significant QTL peak and some other significant SNPs with the p-values over a large range ( Figure 6 ).