Identification of Key Genes and Pathways for Anaerobic Germination Tolerance in Rice Using Weighted Gene Co-Expression Network Analysis (WGCNA) in Association with Quantitative Trait Locus (QTL) Mapping.

S5b) encodes a key enzyme for catabolism of starch, and its expression showed a decreasing trend after anaerobic stress; however, the expression of Os08g0473900 (α-amylase3 isozyme 3D) increased substantially in NIP, and was higher than in HD86.

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Solving the issue of anaerobic stress of rice at the germination stage will be highly significant to allow direct-seeded planting of large areas (Yu et al. 2021 ).

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