For statistically significant regression outputs ( p -value < 1e -5 and Bonferroni-corrected p -value < 0.005), we used the complete set of HiChIP contacts (contact count > 0, may or may not be significant by FitHiChIP in any of the input samples) within the regions A and B to define an aggregated contact map.
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Identifying genetic variants associated with chromatin looping and genome function.
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