In terms of GC content, while we observed little significant difference in GC content in the 5' UTR of eIF3d KD and eIF3e KD , there was a highly significant difference in the CDS and 3' UTR of these knock-downs in both downregulated and upregulated DTEGs, indicating that mRNAs with increased TE tend to have more GC-rich 3' UTRs and, surprisingly, CDS and vice versa.
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Perturbations in eIF3 subunit stoichiometry alter expression of ribosomal proteins and key components of the MAPK signaling pathways.
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