TIPP3 and TIPP3-fast: Improved abundance profiling in metagenomics.

PLoS Comput Biol · 2025 · PMC11970662 · PMID 40184383

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an interesting trendno p-value reported

Nanopore results show an interesting trend of over and underestimations that TIPP3, TIPP3-fast, Bracken(filtered), and Kraken2(filtered) shared ( Fig 7(c) ), except that Bracken(filtered) slightly overestimated the abundances of some species that the three methods above clearly underestimated.

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