Latent Dirichlet Allocation reveals tomato root-associated bacterial interactions responding to hairy root disease.

The most abundant taxon, Paenibacillus ASV11, showed a decreasing trend across all greenhouse types but exhibited higher modeled relative abundance in healthy greenhouses’ ES compared to other categories (Fig. 6 B).

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This taxon showed an increasing trend across greenhouses, with higher modeled relative abundance in healthy greenhouses compared to other greenhouse types in the LS.

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