The comparison of MM1 intensity to PM1 intensity, PM2 intensity to PM1 intensity and MM2 intensity to PM1 intensity in Figure S1A–C indicates that MM1 intensity and PM2 intensity are comparable to PM1 intensity, indicated by a regression slope >0.2 and highly significant positive correlation; but MM2 is not comparable to PM1 with a regression slope <0.07 except that the slope was around 0.68 at the center position ( k = 0), in which case there was only one mismatch nucleotide to the target sequence.
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Hybridization modeling of oligonucleotide SNP arrays for accurate DNA copy number estimation.
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