A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information.

Nucleic Acids Res · 2012 · PMC3326300 · PMID 22228832

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highly significantno p-value reported

This step is particularly useful when our k is smaller than the optimal k 0 , in which case several k- mers are highly significant because they are simple shifts of the same DNA motif.

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