The Triform algorithm: improved sensitivity and specificity in ChIP-Seq peak finding.

BMC Bioinformatics · 2012 · PMC3480842 · PMID 22827163

Europe PMC DOI

hedged sentences

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closest p · 0.0× alpha

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boldest claim

The sentences

highly significantp = 1.2 × 10 -65actually significant

Of the 9555 SRF regions from Triform, 124 regions overlapped with MER57 repeats (with an average overlap of 91%), and 117 of these contained at least two significant binding sites for TFs (from the CisFinder analysis), which is highly significant ( p = 1.2 × 10 -65 according to a Fisher exact test).

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barely significantno p-value reported

However, the difference between Meta and Triform was small and barely significant.

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Quoted from the open-access full text in Europe PMC under the licence the publisher applied. The sentence is reproduced exactly as published; the emphasis is ours.