Nevertheless, for the highly significant common genes detected in both protocols, a reasonable agreement is achieved and they are validated by RT-PCR.
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Impact of library preparation on downstream analysis and interpretation of RNA-Seq data: comparison between Illumina PolyA and NuGEN Ovation protocol.
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The sentences
There was an overall trend that the detected gene expression was higher from the PolyA protocol than the NuGEN (the fitted lowess curve tilted to x-axis).