To identify the highly significant RNAP2 and Med12 peaks, we used the MACS 1.4.1 peak finder with the following parameters: --format SAM --wig --bw 250 --mfold 7,30 -pvalue 1e–5 -g mm [59] .
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Clustering of tissue-specific sub-TADs accompanies the regulation of HoxA genes in developing limbs.
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