Defining the microbial transcriptional response to colitis through integrated host and microbiome profiling.

Differential abundance analysis revealed 1221 and 669 significantly differentially abundant (metagenomics) and expressed (metatranscriptomics) NOGs in colitis, respectively ( Figure 4f and Supplementary Table S3 ), and the overlap between the two data sets was highly significant (overlap=331, hypergeometric test P <0.01).

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