Linkage disequilibrium levels and allele frequency distribution in Blanco Orejinegro and Romosinuano Creole cattle using medium density SNP chip data.

In the LD decay analysis for distances greater than 100 kb and up to 1 Mb and using 100 kb windows, a decreasing trend in the mean r 2 was found ( Figure 3d ), but without showing a sharp decay with the increasing physical distance between markers.

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