This was particularly apparently at day 40 where round microwells showed an overall trend of downregulation, C microwells showed similar numbers of up and downregulated genes, and butterfly and peanut microwells were associated with upregulation of transcripts (Figs. 4 a) (Additional file 1 : Fig.
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Effects of early geometric confinement on the transcriptomic profile of human cerebral organoids.
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The sentences
While some cortical markers ( NEUROD2 , NEUROD6 ) showed significant upregulation at day 40 in all shapes, a notable trend for cortical development was not observed across different shapes and time points.