As expected, there was a highly significant overlap between differentially expressed genes, either from CTCF overexpression ( Supplementary Figure S7A,B ) or CTCF knockdown ( Supplementary Figure S7C,D ) and genes nearby to CTCF binding motifs within accessible chromatin from untreated cells ( Supplementary Figure S7A,C ) or from cells treated with TGFβ for 10 days ( Supplementary Figure S7B,D ).
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CTCF Expression and Dynamic Motif Accessibility Modulates Epithelial-Mesenchymal Gene Expression.
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