Genome-wide association analysis reveals new insights into the genetic architecture of defensive, agro-morphological and quality-related traits in cassava.

We detected highly significant negative phenotypic correlations between dry matter and total carotenoid contents (− 0.31, p < 0.001); mean CMD severity and harvest index (r = − 0.14, p < 0.001); and apical pubescence and CGM severity (r = − 0.27, p < 0.001).

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These properties make cassava an ideal food security crop with an increasing trend in global production (Prudencio and Al-Hassan 1994 ; Burns et al. 2010 ).

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