Normalization benchmark of ATAC-seq datasets shows the importance of accounting for GC-content effects.

Cell Rep Methods · 2022 · PMC9701614 · PMID 36452861

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closest p

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marginal significanceno p-value reported

The following two evaluation measures are computed: the fraction of DA peaks returned at a nominal marginal significance level of 5 % ( FPR ) and the Hellinger distance of the marginal p value distribution with a uniform distribution on the interval [ 0,1 ] ( P-val unif ).

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