Only Gypsy elements and satellite repeats showed extremely significant enrichment in ABA SVs relative to PBA SVs, consistent with the results showing that these two repeats were enriched in private boundaries (Fig. 6 c, d). 3D genome variation and gene expression To address the effect of 3D genome variation on gene expression, we first investigated the relationship between gene expression and A/B compartments.
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Pan-3D genome analysis reveals structural and functional differentiation of soybean genomes.
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