Red-light-responsive metabolome reveals the crucial role of phytochrome A- and B-dependent secondary metabolism in Arabidopsis seed germination.

However, phyAB mutants exhibited minimal metabolic changes and lacked a clear trend when compared with the single mutant phyA-211 or phyB-9 ( Fig. 3A, E ).

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Unexpectedly, 70 metabolites were significantly changed in the pifq mutant under red light, with the levels of amino acids, organic acids, nucleotides, phenylpropanoids, and alkaloids showing an increasing trend ( Fig. 3A, F ).

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