We next examined pathogen abundance and found that rhinovirus RPM was significantly higher in LRTI compared to IPC ( P = 0.047, Wilcoxon rank-sum test), while mean RSV abundance trended higher in LRTI, but the difference did not reach statistical significance ( P = 0.060) (Supplementary Fig.
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Host-microbiome archetypes differentiate infection from pathogen carriage in the human lower airway.
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