Among the correlations of gene expression levels with APOBEC-like motif counts and measures of kataegis, significant or nearly significant correlations were observed for UNG expression with kataegis measures ( ρ between − 0.81 and − 0.80, 0.039 ≤ p adj ≤ 0.063, n = 17, N tests = 475) of the T(C>D)D motif in melanoma, and for APOBEC3A expression with motif counts and kataegis measures in renal cell carcinoma ( ρ between 0.93 and 0.98, 0.008 ≤ p adj ≤ 0.087 with n = 8 and N tests = 510 for the T(C>D)R and T(C>D)D motifs; data not shown).
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Correlation of gene expression and associated mutation profiles of APOBEC3A, APOBEC3B, REV1, UNG, and FHIT with chemosensitivity of cancer cell lines to drug treatment.
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