Comparative transcriptome analysis of mammary epithelial cells at different stages of lactation reveals wide differences in gene expression and pathways regulating milk synthesis between Jersey and Kashmiri cattle.

ing pathway, T cell activation and cholecystokinin receptor (CCKR) signalling pathway were significantly enriched (FDR < 0.05) by DEG of D15 vs D90 and D15 vs D250, respectively in Jersey cattle while only two pathways, purine metabolism (FDR = 0.095) and p38 MAPK pathway (FDR = 0.063) (D15 vs D90) tended towards significance in Kashmiri cattle ( Table 7 and S7 Table ).

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