Personalized pathway enrichment map of putative cancer genes from next generation sequencing data.

PLoS One · 2012 · PMC3356304 · PMID 22624051

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marginally significantno p-value reported

Importantly, our method could effectively reject many marginally significant pathways detected by standard methods, including several long-gene-based, cancer-unrelated pathways.

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a strong trendno p-value reported

Investigation of the MutGenes in this type did not show a strong trend toward any gene(s) substantially contributing to the crosstalk events as observed in the clique-group.

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nominally significantno p-value reported

We selected pathways that were co-mutated in 2 or more samples, and had a co-occurrence P value that was nominally significant.

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Quoted from the open-access full text in Europe PMC under the licence the publisher applied. The sentence is reproduced exactly as published; the emphasis is ours.